BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E03LP1|AL426529
(847 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig767 1015 0.0
3x_Contig1000 188 1e-47
>3x_Contig767
Length = 1770
Score = 1015 bits (512), Expect = 0.0
Identities = 527/531 (99%), Gaps = 1/531 (0%)
Strand = Plus / Plus
Query: 1 gatccaaagattgttcgtttcaccgcattctagacaacgcggcagtngttcattattaac 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1241 gatccaaagattgttcgtttcaccgcattctagacaacgcggcagtggttcattattaac 1300
Query: 61 atcttttaactgtgagtatctgcagacagggcaattaccgtttttccattgatctaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 atcttttaactgtgagtatctgcagacagggcaattaccgtttttccattgatctaggca 1360
Query: 121 cttacaatggaacgtatgtggacaaggggttgtgactaatccagtaacttcgctgtctaa 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 cttacaatggaacgtatgttgacaaggggttgtgactaatccagtaacttcgctgtctaa 1420
Query: 181 tttttctaggcaaacaggacacataggtagttctattaaaccatcagattgttctgaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 tttttctaggcaaacaggacacataggtagttctattaaaccatcagattgttctgaact 1480
Query: 241 actctgagtaaacggatattttaacatgtaggggagagcatctttatcttcactaaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1481 actctgagtaaacggatattttaacatgtaggggagagcatctttatcttcactaaacat 1540
Query: 301 tccttgatgaaatataagctccttaattgctaccacatgacatgtttctggatcaatttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1541 tccttgatgaaatataagctccttaattgctaccacatgacatgtttctggatcaatttc 1600
Query: 361 attgaacttcttcccatcgaagagcttctgaaactctttcgccaagctttgttccttaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1601 attgaacttcttcccatcgaagagcttctgaaactctttcgccaagctttgttccttaaa 1660
Query: 421 tttcatcaaaagcataaaccgtcctttttccttgttcatttttattaattgtaaatgcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1661 tttcatcaaaagcataaaccgtcctttttccttgttcatttttattaattgtaaatgcgt 1720
Query: 481 cacttgattggttgtttcttctccaataaaccatcccaatagtctgtttat 531
|||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1721 cacttgtttggttgtttcttctccaataaa-catcccaatagtctgtttat 1770
>3x_Contig1000
Length = 4837
Score = 188 bits (95), Expect = 1e-47
Identities = 105/107 (98%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 742 acgagaatcagt-cttccgctcaaaagtcaatttgccagacttaaaaaacttataacaat 800
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2 acgagaatcagtacttccgctcaaaattcaatttgccagacttaaaaaacttataacaat 61
Query: 801 cgtctagactttctgttacctcgataagtaatgtatattccatatgg 847
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgtctagactttctgttacctcgataagtaatgtatattccatatgg 108
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6471
Number of Sequences: 1807
Number of extensions: 6471
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 2
length of query: 847
length of database: 10,358,551
effective HSP length: 16
effective length of query: 831
effective length of database: 10,329,639
effective search space: 8583930009
effective search space used: 8583930009
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)